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Contents:

  • Installation Guide
  • Tutorials
  • API documentation
  • References
COSIE
  • References

References

1. Chen R J, et al. (2024), Towards a general-purpose foundation model for computational pathology, Nature Medicine

2. Zhang D, et al. (2024), Inferring super-resolution tissue architecture by integrating spatial transcriptomics with histology, Nature Biotechnology

3. Korsunsky I, et al. (2019), Fast, sensitive and accurate integration of single-cell data with Harmony, Nature Methods

4. Kipf T N, et al. (2016), Variational graph auto-encoders, arXiv

5. Lin Y, et al. (2022), Dual contrastive prediction for incomplete multi-view representation learning, IEEE Transactions on Pattern Analysis and Machine Intelligence

6. Long Y, et al. (2024), Deciphering spatial domains from spatial multi-omics with SpatialGlue, Nature Methods

7. Ben-Chetrit N, et al. (2023), Integration of whole transcriptome spatial profiling with protein markers, Nature Biotechnology

8. Readthedocs templates are adapted from JamesALeedham/Sphinx-Autosummary-Recursion

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